Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903189.1_cds_XP_016453151.1_47305
CDS Infomation

[gene=LOC107777612] [db_xref=GeneID:107777612] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016453151.1] [location=complement(join(89619..90763,91253..91282,91394..91426,91565..92381))] [gbkey=CDS]
Sequence

ATGTCTGGAAGAACCAGGTTTCTTACATTTCTTACCATCCTCATCTTCTGTGAAGCCCCA
TTTGCTGAACAGAACCAGCAGTGTGTCCCTTCTAGTTGTGGGCATATTCAGAACATCAGC
TACCCTTTTCGATTGAAAACTGACCCAAAGCACTGTGGCGATGAAAAGTATGAACTTAGC
TGTGAAGAGAATCGCGCAAAATTATATGGGTATGCGTCGGGCTTTGGATCGATGAATTAC
TACGTGCAAGCCATTAATTATGATAACTCCACAATCCGCATTGTGGATTCTGATATAAGA
GAAGATCTTTGCTCTCTTCCTCAGCAGCAGTATTATGATAACTCCACAATCCGCATTATG
GTTTCCAGTATACCCTCTATTTTTGAGACTTATAAGCGCAGTAATGGTATTCTGCTGGCA
AAACCAATCACTATATTCAGCTGTCCATTTGCCATAAATTATCCAGGCATTGTAGAAATC
ACTAATTGTCTCAACAGGAGTTATGCTTCCAATACTTCTTTTGAATTATTAAAGGGACAC
ACATATGCAACCATGGCCAAATTGTTGCCATCTGATTTGAGAGTAGGGTGTACTATAGAC
CTCATGTTAATGACTTCATGGCATACTGAGGATGCACGTATTTCCATTTTGGATTTACAT
AATGCTTTGGCATATGGGTTCGAACTTTCATGGTTTCCTGTTTACTGTAGCAAGTGCCAA
TATTTATTTGGCTGCGAAGGTGAAAATTCAAGGGATGTTCGCTGTCTGGATTTGAACTGC
AAAGCTTACAATTTTAGATTCTTCAAAACCTTTTGTGTTGCTCAAAGACATGTTCTCCGC
GTTCTTGAAAGAATTATCCCATGGATACTTCCCATATTTGGACTTAGCGTTGTGGCAAGA
ATCATAATATTCCCATGCATATTTGTGTTTCTATTGATTGAATTACGAAGAAGGCATTTG
TCGATTTTTGATGCAATTGAAAGTTTCCTGCATAGTGAGAACAATTTCATGCCCATTCGA
TACCCCTACTCCAACATAAGGAAGATGACTAGGAATTTGAAGGAGAAACTAGGCCAAGGA
GGTTATGGTTCAGTATATAAAGGCAAGCTCCGAAGTGGTCCTGATGTAGCAGTGAAGATC
TTGAGCAAGCCTAAAGCTGATGGGCAAGACTTCATCAATGAGGTTGCCACAATCGGGAGG
ATTCATCATGTTAATGTAGTACAACTTATTGGCTATTGTGCTGAGAGATCTAAACGTGCC
CTTGTATATGACTTCATGCCTAATGGATCACTTGACAAGTACATCACACCCCAAGTAGAA
GGAACTCTACTAAGCTGGCAAAGAAAGTCTGAAATTGCTCTTGGAGTTGCTCGAGGTATT
GAATATTTGCATCGAGGTTGTGACATACAAATTCTACATTTTGACATCAAGCCGCACAAC
ATACTTTTGGATGAGAATTTCGTTCCAAAAATTTCTGACTTTGGTCTTGCCAAATTATAC
CCAACGGATAACAGCATTGTTACTCTAACAGCAGCAAGGGGAACAATTGGATATGTAGCT
CCAGAATTGATCAACAGAAGCATTGGTCCTGTATCTTATAAGGCAGATGTTTATAGCTTT
GGAATGCTGCTAATTGAGATGGCAGGCATGAAAAGAAACTCGGCAGCAAGAGAGGATATG
TCAAGCCAGTATTTCCCACATTGGATCTATGATCAATTCGACAAGGAAAAAGAAATTGAA
GTACTAGACGAGACGCATGATGATGAAAAGAAGATTATAAAGAAGCTAACTTTAGTTGCC
TTGTGGTGCATACAAATGAATCCACTCTATCGTCCCTCAATGACTAAAGTAGTGGAAATG
ATTGAAGGCGAATTACAGGCTTTGCAAACGCCTCCTAGGCCTTCTGAATCACTGCAACCA
TCTCCGTTGGAATTCAATCTGAGTTCTTCAATAGGTTCAACTGAGTCTATGATATTGCTT
GAGAATTGTTCAGATTCTGCAAAAGTAGATGTAATTATTGGTTGA

Peptide Sequence

PEP ID

XP_016453151.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MSGRTRFLTFLTILIFCEAPFAEQNQQCVPSSCGHIQNISYPFRLKTDPKHCGDEKYELS
CEENRAKLYGYASGFGSMNYYVQAINYDNSTIRIVDSDIREDLCSLPQQQYYDNSTIRIM
VSSIPSIFETYKRSNGILLAKPITIFSCPFAINYPGIVEITNCLNRSYASNTSFELLKGH
TYATMAKLLPSDLRVGCTIDLMLMTSWHTEDARISILDLHNALAYGFELSWFPVYCSKCQ
YLFGCEGENSRDVRCLDLNCKAYNFRFFKTFCVAQRHVLRVLERIIPWILPIFGLSVVAR
IIIFPCIFVFLLIELRRRHLSIFDAIESFLHSENNFMPIRYPYSNIRKMTRNLKEKLGQG
GYGSVYKGKLRSGPDVAVKILSKPKADGQDFINEVATIGRIHHVNVVQLIGYCAERSKRA
LVYDFMPNGSLDKYITPQVEGTLLSWQRKSEIALGVARGIEYLHRGCDIQILHFDIKPHN
ILLDENFVPKISDFGLAKLYPTDNSIVTLTAARGTIGYVAPELINRSIGPVSYKADVYSF
GMLLIEMAGMKRNSAAREDMSSQYFPHWIYDQFDKEKEIEVLDETHDDEKKIIKKLTLVA
LWCIQMNPLYRPSMTKVVEMIEGELQALQTPPRPSESLQPSPLEFNLSSSIGSTESMILL
ENCSDSAKVDVIIG

Transcript Sequence

Gene sequence data has not been registered.